Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791595.1_cds_XP_016508113.1_2048
CDS Infomation

[gene=LOC107825724] [db_xref=GeneID:107825724] [protein=probable protein phosphatase 2C 4] [protein_id=XP_016508113.1] [location=complement(join(10614..10729,10830..11094,11383..11496,11599..13059))] [gbkey=CDS]
Sequence

ATGGGTAACGGAGTGAGAAAGTTGAATCTTTGTTTTGCGGGAGATGTTGGAGAAATATCA
AAAAGACATCATGATATAGCTATGAACATAACTGATCCACTTGATGAAGGTTTGGGTCAT
TCTTTTTGCTATATTCGACCCGACCCGTATTCAAAACCCCACCTGTTTTCCGATGATTCG
TCTTCTTCTTCCACTACCACCACTATTTCCAGCGCTAGCAGCTGCCCTACGGCGGCGTTC
CGTACAATCTCCGGCGCCTCCATCTCTGCTAACACCTCAACGCCTTTGTCAACGGCCATC
GTTGACTTTTCTGCTTACAATCATAATATTGATAAAGCTTCAGCTTTTGAGAGTTCTCAG
TTTTTTTCATCCATTCCTCTTCAGCCAATCCCAAGAGGTTCATCATTTGCAGCTTCTGCT
ATTCATTCAGGCCCGATTCCGGCCCGTATTTCTAATATGGGCCCTAGCTCGGGCCCGATC
GAGAGGGGATTCATGTCAGGCCCGATTGAGCGGAGCTTCACCTCGGGCCCGTTGGAGAAC
CAGTATGATCATATCCAAAGGTACAAACCCAAATCCAAGAAATGGGGTTTAATTAGAAGT
TTAAAGAAAGTGTTGTCAAATTCTTTTTTGAGGTTTAATAAAGAAATGAATTTGGTTGAG
AAAAATAATAATAATAATAATAATGAAGTTAATGTTCAAGGGAGTAATAGTCATCATAGT
AATGTTGGAAATAGTTTGAGTAGTCAGAATAGTTTGGTTGATGATGATGATGAGGGAAAT
GACTCATTTAGAGGCCAAAATGTGCATTGGGCTCAAGGTAAAGCAGGGGAAGACAGAGTA
CATGTTGTGATTTCTGAGGAACATGGTTGGGTTTTTGTTGGGATTTATGATGGATTTAAT
GGACCTGATGCTACTGATTTCCTGTTGAATAATCTTTATTCAAATGTCTATAAAGAACTC
AAGGGATTGCTATGGAATGATAAGTTAGAAACCCCCAAGAATTCGACGAGTAACGAGACA
ATTCCATTAAGAAACTCGGGATTTAAGGTGGAACATTTTGTTCAAAATCAAGAATTTGAT
CAGAAGGAGAAATTAGATGGGGTTTTCGGTGTTGACCATTCTGATGTATTGAAGGCTTTA
TCTGAAGGGTTAAGGAAAACCGAGGCGTCATATTTGGAGATTGCTGATATGATGGTAAAG
GAGAATCCTGAATTGGCTTTAATGGGATCTTGTGTTTTAGTAATGTTGCTTAAAGATCAG
GATGTTTATTTGTTGAATGTTGGAGATAGTAGAGCTGTTTTAGCTCAAAATCCGGAATCT
GATATTTCTATTAGCAAGTTGAGAAGGATAAATGAGCAGAGTGTAAATAGCATTGATGCA
CTTTATCGAGCTGAATCTGATCGTAAACATAGTCTAGTTCCTTCTCAACTTACTAAGGAT
CATAGTACATCGATTAAAGAGGAAGTAATTAGGATTAGAAGCGAGCATTTGGATGATCCT
TTCGCGATTAAAAATGATAGAGTGAAAGGTTCCTTGAAAGTTACTCGAGCTTTCGGGGCA
GGATATCTCAAACAGCCCAAGTGGAATAATGCACTTCTAGAGATGTTCAGAATTAACTAC
ATTGGAAATTCACCTTACATAAACTGTCTACCATCACTTTACCACCACACACTTGGTTCA
AGAGACAGATTTTTGATCTTATCATCTGATGGTCTTTACCAATACTTCACAAATGAAGAA
GCAGTCTCAGAAGTAGAGACCTTTATGTCTATATTCCCCGAGGGAGATCCTGCACAACAT
CTCGTCGAAGAAGTGTTATTCAGAGCTGCTAAGAAAGCTGGATTGAACTTCCATGAGTTG
CTCGATATACCTCAAGGAGATCGTAGGAAGTACCATGATGATGTTTCGATTATCATTTTG
TCTTTCGAAGGAAGGATATGGAAATCATCTTTGTAA

Peptide Sequence

PEP ID

XP_016508113.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 4 [Nicotiana tabacum]
Sequence

MGNGVRKLNLCFAGDVGEISKRHHDIAMNITDPLDEGLGHSFCYIRPDPYSKPHLFSDDS
SSSSTTTTISSASSCPTAAFRTISGASISANTSTPLSTAIVDFSAYNHNIDKASAFESSQ
FFSSIPLQPIPRGSSFAASAIHSGPIPARISNMGPSSGPIERGFMSGPIERSFTSGPLEN
QYDHIQRYKPKSKKWGLIRSLKKVLSNSFLRFNKEMNLVEKNNNNNNNEVNVQGSNSHHS
NVGNSLSSQNSLVDDDDEGNDSFRGQNVHWAQGKAGEDRVHVVISEEHGWVFVGIYDGFN
GPDATDFLLNNLYSNVYKELKGLLWNDKLETPKNSTSNETIPLRNSGFKVEHFVQNQEFD
QKEKLDGVFGVDHSDVLKALSEGLRKTEASYLEIADMMVKENPELALMGSCVLVMLLKDQ
DVYLLNVGDSRAVLAQNPESDISISKLRRINEQSVNSIDALYRAESDRKHSLVPSQLTKD
HSTSIKEEVIRIRSEHLDDPFAIKNDRVKGSLKVTRAFGAGYLKQPKWNNALLEMFRINY
IGNSPYINCLPSLYHHTLGSRDRFLILSSDGLYQYFTNEEAVSEVETFMSIFPEGDPAQH
LVEEVLFRAAKKAGLNFHELLDIPQGDRRKYHDDVSIIILSFEGRIWKSSL

Transcript Sequence

Gene sequence data has not been registered.